@Component public class Abcd206Import extends SpecimenImportBase<Abcd206ImportConfigurator,Abcd206ImportState>
CdmImportBase.TermMatchMode
kindOfUnitsMap
CREATE, IMAGE_GALLERY, READ_MEDIA_DATA, uuidUserDefinedAnnotationTypeVocabulary, uuidUserDefinedExtensionTypeVocabulary, uuidUserDefinedFeatureVocabulary, uuidUserDefinedIdentifierTypeVocabulary, uuidUserDefinedKindOfUnitVocabulary, uuidUserDefinedLanguageVocabulary, uuidUserDefinedMarkerTypeVocabulary, uuidUserDefinedMeasurementUnitVocabulary, uuidUserDefinedModifierVocabulary, uuidUserDefinedNamedAreaLevelVocabulary, uuidUserDefinedNamedAreaVocabulary, uuidUserDefinedNomenclaturalStatusTypeVocabulary, uuidUserDefinedPresenceAbsenceVocabulary, uuidUserDefinedRankVocabulary, uuidUserDefinedReferenceSystemVocabulary, uuidUserDefinedStateVocabulary, uuidUserDefinedStatisticalMeasureVocabulary, uuidUserDefinedTaxonRelationshipTypeVocabulary
INCLUDE_UNPUBLISHED, ioName, NO_UNPUBLISHED
applicationContext
FEATURE_STORE, NOMREF_STORE, REFERENCE_STORE, SPECIMEN_STORE, TAXON_STORE, TAXONNAME_STORE, TEAM_STORE
Constructor and Description |
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Abcd206Import() |
Modifier and Type | Method and Description |
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protected boolean |
doCheck(Abcd206ImportState state) |
void |
doInvoke(Abcd206ImportState state)
invoke method to be implemented by implementing classes
|
protected DerivedUnitFacade |
getFacade(Abcd206ImportState state)
getFacade : get the DerivedUnitFacade based on the recordBasis
|
protected DefinedTerm |
getKindOfUnit(Abcd206ImportState state,
java.util.UUID uuid,
java.lang.String label,
java.lang.String description,
java.lang.String labelAbbrev,
TermVocabulary<DefinedTerm> voc) |
void |
handleSingleUnit(Abcd206ImportState state,
java.lang.Object itemObject)
Handle a single unit
|
void |
handleSingleUnit(Abcd206ImportState state,
java.lang.Object itemObject,
boolean handleAssociatedUnits) |
protected void |
importAssociatedUnits(Abcd206ImportState state,
java.lang.Object itemObject,
DerivedUnitFacade derivedUnitFacade) |
protected boolean |
isIgnore(Abcd206ImportState state)
Returns true if this (IO-)class should be ignored during the import/export process.
|
protected void |
setCollectionData(Abcd206ImportState state,
DerivedUnitFacade derivedUnitFacade)
setCollectionData : store the collection object into the
derivedUnitFacade
|
addParentTaxon, addTaxonNode, addToSourceMap, findExistingSpecimen, getBestMatchingName, getCollection, getIdentifiableSource, getInstitution, getOrCreateTaxonForName, getOrCreateTaxonName, handleIdentifications, linkDeterminationEvent, linkParentChildNode, makeIndividualsAssociation, parseScientificName, save, setTaxonNameByType
addOriginalSource, addOriginalSource, doubleFromString, fillMissingEpithets, fillMissingEpithetsForTaxa, getAcceptedTaxon, getAnnotationType, getByteArray, getDefaultResult, getDefaultTaxonDescription, getExtensionType, getExtensionType, getFeature, getFeature, getFeaturePlaceholder, getIdentiferType, getImageMedia, getImageMedia, getImageMedia, getLanguage, getLanguage, getMarkedTaxonDescription, getMarkerType, getMarkerType, getMarkerType, getMarkerType, getMeasurementUnit, getModifier, getNamedArea, getNamedArea, getNamedArea, getNamedAreaLevel, getNoDataResult, getNomenclaturalStatusType, getPresenceTerm, getPresenceTerm, getRank, getReferenceSystem, getSpecimenDescription, getSpecimenDescription, getStateTerm, getStateTerm, getStatisticalMeasure, getTaxonDescription, getTaxonDescription, getTaxonNameDescription, getTaxonNameDescription, getTaxonRelationshipType, getVocabulary, intFromString, makeTree, makeTreeMemSave, NB, nullSafeBoolean, nullSafeDouble, nullSafeFloat, nullSafeInt, parseAuthorString, saveNameRelations
addObserver, addObservers, check, commitTransaction, countObservers, countSteps, fire, fireProgressEvent, fireWarningEvent, fireWarningEvent, getInstance, getObservers, getSuccessString, invoke, isBlank, isNotBlank, removeObserver, removeObservers, rollbackTransaction, startTransaction, startTransaction, updateProgress, updateProgress, warnProgress
authenticate, clearSession, getAgentService, getAmplificationService, getAnnotationService, getAuthenticationManager, getBean, getClassificationService, getCollectionService, getCommonService, getDatabaseService, getDescriptionService, getDescriptiveDataSetService, getEntityConstraintViolationService, getEntityValidationService, getEventBaseService, getFeatureNodeService, getFeatureTreeService, getGrantedAuthorityService, getGroupService, getIdentificationKeyService, getLocationService, getLongRunningTasksService, getMediaService, getMetadataService, getNameService, getOccurrenceService, getPermissionEvaluator, getPolytomousKeyNodeService, getPolytomousKeyService, getPreferenceService, getPrimerService, getProgressMonitorService, getReferenceService, getRegistrationService, getRightsService, getSequenceService, getSession, getSessionFactory, getTaxonNodeService, getTaxonService, getTermNodeService, getTermService, getTermTreeService, getTransactionManager, getUserService, getVocabularyService, NewConversation, setApplicationContext, setDataSource, setSessionFactory, setTransactionManager
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
invoke
check, countSteps, fire, updateProgress, updateProgress, warnProgress
addObserver, addObservers, countObservers, getObservers, removeObserver, removeObservers
public void doInvoke(Abcd206ImportState state)
CdmIoBase
doInvoke
in class SpecimenImportBase<Abcd206ImportConfigurator,Abcd206ImportState>
public void handleSingleUnit(Abcd206ImportState state, java.lang.Object itemObject)
handleSingleUnit
in class SpecimenImportBase<Abcd206ImportConfigurator,Abcd206ImportState>
state
- item
- public void handleSingleUnit(Abcd206ImportState state, java.lang.Object itemObject, boolean handleAssociatedUnits)
protected void importAssociatedUnits(Abcd206ImportState state, java.lang.Object itemObject, DerivedUnitFacade derivedUnitFacade)
importAssociatedUnits
in class SpecimenImportBase<Abcd206ImportConfigurator,Abcd206ImportState>
protected void setCollectionData(Abcd206ImportState state, DerivedUnitFacade derivedUnitFacade)
state
- protected DerivedUnitFacade getFacade(Abcd206ImportState state)
getFacade
in class SpecimenImportBase<Abcd206ImportConfigurator,Abcd206ImportState>
state
- protected boolean doCheck(Abcd206ImportState state)
doCheck
in class CdmIoBase<Abcd206ImportState,ImportResult>
protected boolean isIgnore(Abcd206ImportState state)
CdmIoBase
isIgnore
in class CdmIoBase<Abcd206ImportState,ImportResult>
protected DefinedTerm getKindOfUnit(Abcd206ImportState state, java.util.UUID uuid, java.lang.String label, java.lang.String description, java.lang.String labelAbbrev, TermVocabulary<DefinedTerm> voc)
getKindOfUnit
in class CdmImportBase<Abcd206ImportConfigurator,Abcd206ImportState>
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