Package | Description |
---|---|
eu.etaxonomy.cdm.model.description |
Provides classes:
to describe specimens, observations or taxa,
to associate other factual informations to specimens, observations or taxa (including distribution),
to supply additional information about taxon names and
to support identification by means of keys.
Related documentation
UML Diagrams |
eu.etaxonomy.cdm.model.media | |
eu.etaxonomy.cdm.model.molecular |
Provides classes for DNA samples and related sequences.
|
eu.etaxonomy.cdm.model.occurrence |
Provides classes for specimens, collections and field units.
|
Modifier and Type | Class and Description |
---|---|
class |
CategoricalData
This class represents information pieces expressed in categorical type of
data (in opposition to
quantitative data on one side and to literal data on
the other side). |
class |
CommonTaxonName
This class represents common or vernacular names for
taxa . |
class |
DescriptionElementBase
The upmost (abstract) class for a piece of information) about
a
specimen , a taxon or even a taxon name . |
class |
Distribution
This class represents elementary distribution data for a
taxon . |
class |
IndividualsAssociation
This class represents associations between the described
specimen or observation
and a second one (for instance a host). |
class |
KeyStatement
This class represents a statement or a question within a (polytomous) key.
|
class |
MediaKey
The class representing single-access fixed dichotomous or polytomous authored
decision keys (as opposed to
multiple-access keys ) used to identify
specimens or observations (this means to assign taxa to). |
class |
PolytomousKeyNode
This class represents a node within a
polytomous key
structure. |
class |
QuantitativeData
This class represents information pieces expressed in numerical data
(in opposition to
categorical data on one side and to literal data on
the other side). |
class |
StateData
This class represents the assignment of values (
state terms ) to features
corresponding to categorical data . |
class |
TaxonInteraction
This class represents interactions between the described
taxon
and a second one (for instance a parasite, a prey or a hybrid parent). |
class |
TextData
This class represents information pieces expressed in one or several natural
languages (for the
feature "medical use" for instance). |
Modifier and Type | Class and Description |
---|---|
class |
Media
A
media is any kind of media that represents a media object. |
Modifier and Type | Class and Description |
---|---|
class |
DnaSample
A DNA Sample is the extracted DNA of a given tissue sample.
|
class |
PhylogeneticTree
"A phylogenetic tree or evolutionary tree is a branching diagram or "tree" showing the
inferred evolutionary relationships among various biological species or other entities
based upon similarities and differences in their physical and/or genetic characteristics.
|
Modifier and Type | Class and Description |
---|---|
class |
DerivedUnit
A derived unit is regarded as derived from a field unit,
so locality and gathering related information is captured as a separate FieldUnit object
related to a specimen via a derivation event
http://www.bgbm.org/biodivinf/docs/CollectionModel/ReprintTNR.pdf
http://www.bgbm.org/biodivinf/docs/CollectionModel/
Type figures are derived units with at least a figure object in media |
class |
FieldUnit
In situ observation of a taxon in the field.
|
class |
MediaSpecimen
Instances of MediaSpecimen represent a specimen which IS a media (photo, drawing, ...).
|
class |
SpecimenOrObservationBase<S extends IIdentifiableEntityCacheStrategy<?>>
type figures are observations with at least a figure object in media
|
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