Package | Description |
---|---|
eu.etaxonomy.cdm.api.service.dto | |
eu.etaxonomy.cdm.model.molecular |
Provides classes for DNA samples and related sequences.
|
Modifier and Type | Method and Description |
---|---|
SequenceString |
SequenceDTO.getBarcodeSequencePart() |
SequenceString |
SequenceDTO.getConsensusSequence() |
Modifier and Type | Method and Description |
---|---|
SequenceString |
Sequence.getBarcodeSequencePart()
If the barcode sequence string does not include 100% of the (consensus) sequence
the part used as barcode is provided here.
|
SequenceString |
Sequence.getConsensusSequence()
The resulting consensus sequence represened by this
sequence . |
SequenceString |
SingleRead.getSequence()
The
sequence string of this single sequence process (e.g. |
SequenceString |
Primer.getSequence()
The DNA
Sequence of this primer. |
static SequenceString |
SequenceString.NewInstance() |
static SequenceString |
SequenceString.NewInstance(java.lang.String sequence) |
Modifier and Type | Method and Description |
---|---|
void |
Sequence.setBarcodeSequencePart(SequenceString barcodeSequencePart) |
void |
Sequence.setConsensusSequence(SequenceString sequenceString) |
void |
SingleRead.setSequence(SequenceString sequence) |
void |
Primer.setSequence(SequenceString sequence) |
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