Modifier and Type | Class and Description |
---|---|
class |
CdmApplicationController |
class |
CdmApplicationDefaultConfiguration |
Modifier and Type | Field and Description |
---|---|
protected ICdmApplicationConfiguration |
CdmApplicationController.configuration |
Modifier and Type | Method and Description |
---|---|
ICdmApplicationConfiguration |
BatchValidator.getAppController()
Get the application context that will provide the services that will, on
their turn, provide the entities to be validated.
|
Modifier and Type | Method and Description |
---|---|
void |
BatchValidator.setAppController(ICdmApplicationConfiguration context)
Set the application context.
|
Modifier and Type | Method and Description |
---|---|
List<Collection> |
IBciServiceWrapper.getCollectionsByCode(String code,
ICdmApplicationConfiguration appConfig)
Returns a list of collections collection code.
|
List<Collection> |
BciServiceWrapper.getCollectionsByCode(String code,
ICdmApplicationConfiguration appConfig) |
Modifier and Type | Method and Description |
---|---|
List<Person> |
IpniService.getAuthors(String abbreviation,
String surname,
String forename,
String isoCountry,
ICdmApplicationConfiguration services,
IpniServiceAuthorConfigurator config) |
List<Person> |
IIpniService.getAuthors(String abbreviation,
String surname,
String forename,
String isoCountry,
ICdmApplicationConfiguration appConfig,
IpniServiceAuthorConfigurator config)
Returns a list of persons (authors) defined by their abbreviation, surname, forename and/or isoCountry.
|
List<BotanicalName> |
IpniService.getNamesAdvanced(String family,
String genus,
String species,
String infraFamily,
String infraGenus,
String infraSpecies,
String authorAbbrev,
Boolean includePublicationAuthors,
Boolean includeBasionymAuthors,
String publicationTitle,
Boolean isAPNIRecord,
Boolean isGCIRecord,
Boolean isIKRecord,
IpniService.IpniRank rankToReturn,
Boolean sortByFamily,
IpniServiceNamesConfigurator config,
ICdmApplicationConfiguration services) |
List<BotanicalName> |
IIpniService.getNamesAdvanced(String family,
String genus,
String species,
String infraFamily,
String infraGenus,
String infraSpecies,
String authorAbbrev,
Boolean includePublicationAuthors,
Boolean includeBasionymAuthors,
String publicationTitle,
Boolean isAPNIRecord,
Boolean isGCIRecord,
Boolean isIKRecord,
IpniService.IpniRank ipniRankToReturn,
Boolean sortByFamily,
IpniServiceNamesConfigurator config,
ICdmApplicationConfiguration appConfig)
Returns a list of names matching the relevant parameters according to the IPNI full search function.
|
List<BotanicalName> |
IpniService.getNamesAdvanced(String family,
String genus,
String species,
String infraFamily,
String infraGenus,
String infraSpecies,
String authorAbbrev,
Boolean includePublicationAuthors,
Boolean includeBasionymAuthors,
String publicationTitle,
Boolean isAPNIRecord,
Boolean isGCIRecord,
Boolean isIKRecord,
Rank rankInRangeToReturn,
Boolean sortByFamily,
IpniServiceNamesConfigurator config,
ICdmApplicationConfiguration services) |
List<BotanicalName> |
IIpniService.getNamesAdvanced(String family,
String genus,
String species,
String infraFamily,
String infraGenus,
String infraSpecies,
String authorAbbrev,
Boolean includePublicationAuthors,
Boolean includeBasionymAuthors,
String publicationTitle,
Boolean isAPNIRecord,
Boolean isGCIRecord,
Boolean isIKRecord,
Rank rankRangeToReturn,
Boolean sortByFamily,
IpniServiceNamesConfigurator config,
ICdmApplicationConfiguration appConfig)
As
#getNamesAdvanced(String, String, String, String, String, String, String, Boolean, Boolean, String, Boolean, Boolean, Boolean, IpniRank, Boolean, IpniServiceNamesConfigurator, ICdmApplicationConfiguration)
but using CDM Rank instead of IpniRank. |
List<BotanicalName> |
IpniService.getNamesSimple(String wholeName,
ICdmApplicationConfiguration services,
IpniServiceNamesConfigurator config) |
List<BotanicalName> |
IIpniService.getNamesSimple(String wholeName,
ICdmApplicationConfiguration services,
IpniServiceNamesConfigurator config)
Returns a list of names matching the wholeName parameter according to the IPNI Quick search function.
|
List<Reference> |
IpniService.getPublications(String title,
String abbreviation,
ICdmApplicationConfiguration services,
IpniServicePublicationConfigurator config) |
List<Reference> |
IIpniService.getPublications(String title,
String abbreviation,
ICdmApplicationConfiguration services,
IpniServicePublicationConfigurator config)
Returns a list of publications matching the title and/or the abbreviation parameter according to the IPNI Publication search function.
|
Modifier and Type | Class and Description |
---|---|
class |
CdmIoApplicationController |
Modifier and Type | Class and Description |
---|---|
class |
CacheUpdater |
class |
CacheUpdaterWithNewCacheStrategy |
class |
CacheUpdaterWrapper |
class |
CdmExportBase<CONFIG extends IExportConfigurator<STATE,TRANSFORM>,STATE extends ExportStateBase,TRANSFORM extends IExportTransformer> |
class |
CdmImportBase<CONFIG extends IImportConfigurator,STATE extends ImportStateBase> |
class |
CdmIoBase<STATE extends IoStateBase> |
class |
DbExportBase<CONFIG extends DbExportConfiguratorBase<STATE,TRANSFORM>,STATE extends ExportStateBase<CONFIG,TRANSFORM>,TRANSFORM extends IExportTransformer> |
class |
DbImportBase<STATE extends DbImportStateBase<CONFIG,STATE>,CONFIG extends DbImportConfiguratorBase<STATE>> |
class |
DeleteNonReferencedreferencesUpdater |
class |
SortIndexUpdaterWrapper |
class |
XmlImportBase<CONFIG extends XmlImportConfiguratorBase<STATE>,STATE extends XmlImportState<CONFIG,?>>
Base class for XML imports
|
Modifier and Type | Field and Description |
---|---|
protected ICdmApplicationConfiguration |
CdmDefaultIOBase.cdmApp |
protected ICdmApplicationConfiguration |
IoConfiguratorBase.cdmApp |
Modifier and Type | Method and Description |
---|---|
ICdmApplicationConfiguration |
CdmDefaultIOBase.getCdmAppController()
Returns the
CdmApplicationController . |
ICdmApplicationConfiguration |
IoConfiguratorBase.getCdmAppController() |
ICdmApplicationConfiguration |
IIoConfigurator.getCdmAppController()
Returns the CdmApplicationController
|
ICdmApplicationConfiguration |
ExportConfiguratorBase.getCdmAppController(boolean createNew)
Returns a
CdmApplicationController created by the values of this configuration. |
ICdmApplicationConfiguration |
ExportConfiguratorBase.getCdmAppController(boolean createNew,
boolean omitTermLoading)
Returns a
CdmApplicationController created by the values of this configuration. |
ICdmApplicationConfiguration |
ExportConfiguratorBase.getNewCdmAppController()
Returns a new instance of
CdmApplicationController created by the values of this configuration. |
Modifier and Type | Method and Description |
---|---|
void |
CdmDefaultIOBase.setCdmAppController(ICdmApplicationConfiguration cdmApp) |
void |
IoConfiguratorBase.setCdmAppController(ICdmApplicationConfiguration cdmApp) |
void |
IIoConfigurator.setCdmAppController(ICdmApplicationConfiguration cdmApp)
Sets the CdmApplicationController
|
Modifier and Type | Class and Description |
---|---|
class |
CsvNameExport |
class |
CsvNameExportBase |
Modifier and Type | Class and Description |
---|---|
class |
CsvDemoBase |
class |
CsvDemoExport |
Modifier and Type | Class and Description |
---|---|
class |
CsvExportBaseRedlist |
class |
CsvTaxExportRedlist |
Modifier and Type | Class and Description |
---|---|
class |
DwcaDataImportBase<CONFIG extends DwcaDataImportConfiguratorBase<STATE>,STATE extends DwcaDataImportStateBase<CONFIG>> |
class |
DwcaImport |
Modifier and Type | Class and Description |
---|---|
class |
DwcaDescriptionExport |
class |
DwcaDistributionExport |
class |
DwcaEmlExport |
class |
DwcaExportBase |
class |
DwcaImageExport |
class |
DwcaMetaDataExport |
class |
DwcaReferenceExport |
class |
DwcaResourceRelationExport
Mapps taxon concept relationships, taxon name relationships and taxon interactions
|
class |
DwcaTaxExport |
class |
DwcaTypesExport |
class |
DwcaVernacularExport |
class |
DwcaZipExport |
Modifier and Type | Class and Description |
---|---|
class |
ExcelImporterBase<STATE extends ExcelImportState<? extends ExcelImportConfiguratorBase,? extends ExcelRowBase>> |
class |
ExcelTaxonOrSpecimenImportBase<STATE extends ExcelImportState<? extends ExcelImportConfiguratorBase,ROW>,ROW extends ExcelRowBase> |
Modifier and Type | Class and Description |
---|---|
class |
DistributionImport |
Modifier and Type | Class and Description |
---|---|
class |
ExcelStreamImport |
Modifier and Type | Class and Description |
---|---|
class |
NormalExplicitImport |
class |
TaxonExcelImporterBase |
Modifier and Type | Class and Description |
---|---|
class |
JaxbExport |
class |
JaxbImport |
Modifier and Type | Class and Description |
---|---|
class |
MarkupDocumentImport |
Modifier and Type | Class and Description |
---|---|
class |
PilotOutputDescriptionExporter |
class |
PilotOutputExporter |
Modifier and Type | Class and Description |
---|---|
class |
EndNoteImportBase |
class |
EndnoteRecordsImport |
Modifier and Type | Class and Description |
---|---|
class |
SDDIoBase |
Modifier and Type | Class and Description |
---|---|
class |
IkeyPlusImport |
Modifier and Type | Class and Description |
---|---|
class |
SDDImport |
Modifier and Type | Class and Description |
---|---|
class |
SDDCdmExporter |
Modifier and Type | Class and Description |
---|---|
class |
SpecimenImportBase<CONFIG extends IImportConfigurator,STATE extends SpecimenImportStateBase> |
Modifier and Type | Method and Description |
---|---|
ICdmApplicationConfiguration |
SpecimenImportStateBase.getCdmRepository() |
Modifier and Type | Method and Description |
---|---|
void |
SpecimenImportStateBase.setCdmRepository(ICdmApplicationConfiguration cdmRepository) |
Modifier and Type | Class and Description |
---|---|
class |
Abcd206Import |
Modifier and Type | Method and Description |
---|---|
static Reference |
AbcdParseUtility.parseFirstReference(NodeList referenceNodeList,
ICdmApplicationConfiguration cdmAppController) |
Constructor and Description |
---|
AbcdPersonParser(String prefix,
SpecimenImportReport report,
ICdmApplicationConfiguration cdmAppController) |
UnitAssociationParser(String prefix,
SpecimenImportReport report,
ICdmApplicationConfiguration cdmAppController) |
Constructor and Description |
---|
AbcdDnaParser(String prefix,
SpecimenImportReport report,
ICdmApplicationConfiguration cdmAppController) |
AbcdGgbnParser(SpecimenImportReport report,
ICdmApplicationConfiguration cdmAppController) |
Modifier and Type | Class and Description |
---|---|
class |
ExtensionTypeExcelImport |
class |
NamedAreaLevelExcelImport |
class |
SpecimenCdmExcelImport |
class |
SpecimenSythesysExcelImport |
Modifier and Type | Class and Description |
---|---|
class |
GbifImport |
Modifier and Type | Method and Description |
---|---|
ICdmApplicationConfiguration |
GbifImportState.getCdmRepository() |
Modifier and Type | Method and Description |
---|---|
void |
GbifImportState.setCdmRepository(ICdmApplicationConfiguration cdmRepository) |
Modifier and Type | Class and Description |
---|---|
class |
StreamImportBase<CONFIG extends StreamImportConfiguratorBase,STATE extends StreamImportStateBase<CONFIG,StreamImportBase>> |
Modifier and Type | Class and Description |
---|---|
class |
TaxonXDescriptionImport |
class |
TaxonXModsImport |
class |
TaxonXNomenclatureImport |
Modifier and Type | Class and Description |
---|---|
class |
TaxonXImport |
Modifier and Type | Class and Description |
---|---|
class |
TcsRdfImportBase |
class |
TcsRdfReferenceImport |
class |
TcsRdfTaxonImport |
class |
TcsRdfTaxonNameImport |
class |
TcsRdfTaxonNameRelationsImport |
class |
TcsRdfTaxonRelationsImport |
Modifier and Type | Class and Description |
---|---|
class |
TcsXmlImportBase |
class |
TcsXmlMetaDataImport |
class |
TcsXmlPublicationsImport |
class |
TcsXmlSpecimensImport |
class |
TcsXmlTaxonImport |
class |
TcsXmlTaxonNameImport |
class |
TcsXmlTaxonNameRelationsImport |
class |
TcsXmlTaxonRelationsImport |
Modifier and Type | Class and Description |
---|---|
class |
TcsXmlExportBase<T extends CdmBase> |
Modifier and Type | Method and Description |
---|---|
ICdmApplicationConfiguration |
PublishConfigurator.getApplicationConfiguration()
The application controller
associated with this instance
|
Modifier and Type | Method and Description |
---|---|
static PublishConfigurator |
PublishConfigurator.NewLocalInstance(ICdmApplicationConfiguration applicationConfiguration)
Creates a new instance connected to the given application controller.
|
Constructor and Description |
---|
LocalXMLEntityFactory(ICdmApplicationConfiguration applicationConfiguration,
IProgressMonitor monitor) |
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